STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0187Putative transcriptional regulator. (296 aa)    
Predicted Functional Partners:
AZC_0186
Putative ABC transporter iron compound-binding protein.
 
    0.845
fepC
Putative ferric enterobactin transport ATP-binding protein.
 
    0.637
AZC_0185
Putative ABC-type Fe3+-siderophore transport system; Permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.598
AZC_0184
Putative iron compound permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.585
rpiR-2
Transcriptional regulator; RpiR family.
 
   
 0.565
AZC_4019
Putative membrane protein.
  
     0.505
AZC_1647
Protein of unknown function; DUF6, transmembrane.
  
     0.452
AZC_2990
Aspartylglucosaminidase family protein.
  
    0.418
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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