Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AZC_0357 | AZC_0358 | Unknown protein. | Protein of unknown function; DUF883, ElaB. | 0.773 |
AZC_0357 | AZC_0359 | Unknown protein. | Response regulator receiver. | 0.588 |
AZC_0357 | AZC_0360 | Unknown protein. | Putative signal transduction histidine kinase. | 0.412 |
AZC_0358 | AZC_0357 | Protein of unknown function; DUF883, ElaB. | Unknown protein. | 0.773 |
AZC_0358 | AZC_0359 | Protein of unknown function; DUF883, ElaB. | Response regulator receiver. | 0.622 |
AZC_0358 | AZC_0360 | Protein of unknown function; DUF883, ElaB. | Putative signal transduction histidine kinase. | 0.424 |
AZC_0359 | AZC_0357 | Response regulator receiver. | Unknown protein. | 0.588 |
AZC_0359 | AZC_0358 | Response regulator receiver. | Protein of unknown function; DUF883, ElaB. | 0.622 |
AZC_0359 | AZC_0360 | Response regulator receiver. | Putative signal transduction histidine kinase. | 0.907 |
AZC_0360 | AZC_0357 | Putative signal transduction histidine kinase. | Unknown protein. | 0.412 |
AZC_0360 | AZC_0358 | Putative signal transduction histidine kinase. | Protein of unknown function; DUF883, ElaB. | 0.424 |
AZC_0360 | AZC_0359 | Putative signal transduction histidine kinase. | Response regulator receiver. | 0.907 |