STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0378Extracellular solute-binding protein; Family 3 precursor. (290 aa)    
Predicted Functional Partners:
AZC_2071
Amino acid ABC transporter permease protein.
   0.769
AZC_3872
Putative amino acid ABC transporter permease protein.
 
   0.766
AZC_3871
Putative ABC amino acid transporter permease/substrate-binding protein.
 
   0.759
AZC_1925
Glutamate/aspartate transport system permease protein 1.
 
 
 0.749
AZC_1837
Polar amino acid uptake family ABC transporter permease protein 1.
 
   0.740
AZC_2681
Amino acid ABC transporter permease protein; 3-TM region, His/Glu/Gln/Arg/opine.
 
   0.738
AZC_1926
Glutamate/aspartate transport system permease protein 2.
 
   0.726
AZC_0817
ABC transporter permease protein.
 
   0.719
AZC_2680
Amino acid ABC transporter permease protein; 3-TM region, His/Glu/Gln/Arg/opine.
 
   0.715
AZC_1449
ABC transporter permease protein.
 
   0.714
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.