STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0414Histone deacetylase superfamily. (309 aa)    
Predicted Functional Partners:
AZC_3408
ATPase.
   
 0.746
htpG
Chaperone protein; Molecular chaperone. Has ATPase activity.
   
 0.720
AZC_0287
WD-40 repeat G-protein beta.
    
 0.631
AZC_2218
Putative transmembrane protein.
    
 0.631
AZC_0503
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.614
AZC_4657
GCN5-related N-acetyltransferase; CoA binding domain.
 
     0.599
AZC_3405
Flavin-containing protein; Amine oxidase family.
   
 0.583
AZC_4451
Conserved hypothetical protein; Amine oxidase.
   
 0.583
AZC_4484
Amine oxidase precursor.
   
 0.583
AZC_1935
Silent information regulator protein.
    
 
 0.551
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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