STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0441Conserved hypothetical protein; tRNA-binding arm; Belongs to the UPF0335 family. (97 aa)    
Predicted Functional Partners:
AZC_4485
Protein of unknown function; DUF1321.
  
   
 0.794
AZC_0540
DNA polymerase III chi subunit.
  
     0.748
AZC_1470
Protein of unknown function; DUF1013.
  
   
 0.735
atpF1
Putative Fo ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
   
 0.725
AZC_0237
Protein of unknown function; DUF1058.
  
     0.720
AZC_0713
Conserved hypothetical protein; Inactivated superfamily I helicase.
  
     0.698
recO
Recombination protein O; Involved in DNA repair and RecF pathway recombination.
  
     0.697
AZC_4675
Glutathione S-transferase; C-terminal.
  
     0.696
AZC_0714
Putative exonuclease V; Helicase activity based on COG assignment; Belongs to the helicase family. UvrD subfamily.
  
     0.658
AZC_3980
Hypothetical protein.
  
     0.634
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.