STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0487Uncharacterized protein; Putative to be involved in C-type cytochrome biogenesis, COG4233. (278 aa)    
Predicted Functional Partners:
AZC_0348
Putative small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.711
AZC_0488
Protein of unknown function; DUF179; Belongs to the UPF0301 (AlgH) family.
 
     0.615
hsp20
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.556
AZC_0486
Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.548
AZC_4269
N-formylglutamate amidohydrolase.
  
     0.492
praR
Putative transcriptional regulator; PhrR-like regulator conserved in the Alphaproteobacteria; helix-turn-helix motif; praR is involved in the expression of reb genes.
  
     0.470
AZC_1095
Protein of unknown function; DUF1491.
  
     0.470
AZC_0225
Conserved hypothetical protein; Methyltransferase type 11.
  
     0.462
AZC_4257
Thioredoxin precursor.
 
   
 0.404
atpF1
Putative Fo ATP synthase B chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.402
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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