STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0546Outer membrane autotransporter barrel protein. (1159 aa)    
Predicted Functional Partners:
fhaC
Putative hemolysin activation/secretion protein.
  
  
 0.625
AZC_0545
Putative esterase; Lipase.
       0.608
AZC_3234
Putative outer membrane autotransporter barrel.
  
     0.584
AZC_1692
Putative protease.
  
     0.540
AZC_0989
Putative transmembrane protein.
  
     0.530
AZC_1359
Bacterial membrane protein of unknown function.
  
     0.515
AZC_2588
Protein of unknown function; DUF343.
  
    0.510
AZC_2862
Hypothetical protein.
  
  
 0.482
AZC_0980
Conserved hypothetical protein.
  
     0.474
AZC_2785
Hypothetical protein.
  
  
 0.423
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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