STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0551Conserved hypothetical transmembrane protein precursor. (838 aa)    
Predicted Functional Partners:
AZC_0550
SCP-like extracellular protein precursor.
       0.656
AZC_1214
Putative outer membrane protein 2.
  
     0.508
dapE
Proteobacterial succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
       0.478
AZC_2890
Putative serine/threonine protein kinase.
  
     0.465
AZC_2964
Uncharacterized conserved protein.
  
     0.458
AZC_0553
Conserved hypothetical protein; MhpC, putative hydrolases or acyltransferase.
       0.449
AZC_1642
Putative mechanosensitive ion channel protein.
 
  
0.439
AZC_2962
Potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.439
AZC_1068
Conserved hypothetical protein; Multiple antibiotic resistance (MarC)-related proteins.
  
    0.434
AZC_1539
Multiple antibiotic resistance (MarC)-related protein.
  
    0.434
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.