STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupJRubredoxin. (301 aa)    
Predicted Functional Partners:
hupG
Hydrogenase expression/formation protein.
 
  
 0.988
hupH
Hydrogenase expression/formation protein.
 
  
 0.986
hupK
Hydrogenase expression/formation protein.
 
  
 0.963
hupF
Hydrogenase expression/formation protein.
 
  
 0.960
hupD
Hydrogen uptake protein.
 
  
 0.958
hypA
Hydrogenase expression/synthesis protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.952
hupS
Ni-Fe hydrogenase small subunit protein.
 
 
 0.916
hupC
HupC protein.
 
  
 0.914
hoxA
HoxA protein.
 
  
 0.909
hupU
HupU protein.
 
 
 0.903
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.