STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0695ABC-type uncharacterized transport system permease component; Belongs to the NiCoT transporter (TC 2.A.52) family. (331 aa)    
Predicted Functional Partners:
AZC_0694
Conserved hypothetical protein; Unknown function (DUF1007).
   
 0.995
AZC_2961
Conserved hypothetical protein; Invasion associated locus B.
  
     0.631
AZC_2218
Putative transmembrane protein.
  
     0.625
AZC_2357
Protein conserved in bacteria, COG3184.
  
     0.620
AZC_0949
Hypothetical protein.
  
     0.618
AZC_1201
Hypothetical protein.
  
     0.616
AZC_1097
Putative integral membrane protein.
  
     0.610
AZC_0696
Putative acetyltransferase.
       0.603
AZC_4671
Hypothetical protein.
  
     0.596
AZC_1080
Hypothetical protein.
  
     0.562
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.