STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0723Hypothetical membrane protein. (398 aa)    
Predicted Functional Partners:
AZC_1359
Bacterial membrane protein of unknown function.
  
     0.702
AZC_1357
Membrane fusion protein; FusE-MFP/HlyD family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.631
AZC_0989
Putative transmembrane protein.
  
     0.575
AZC_1307
Lysophospholipase.
  
     0.572
AZC_0722
Thiamine pyrophosphate-requiring enzymes; Belongs to the TPP enzyme family.
       0.527
AZC_1915
With a C-terminal OMP (outer membrane protein) domain COG4625.
  
     0.483
AZC_2635
With a C-terminal OMP (outer membrane protein) domain.
  
     0.474
nifU
NifU-like protein.
   
    0.457
nifQ
NifQ protein.
   
    0.457
AZC_3887
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
    0.439
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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