STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0728Amino acid ABC transporter permease protein. (538 aa)    
Predicted Functional Partners:
AZC_0727
Amino acid ABC transporter ATP-binding protein.
 
 0.963
AZC_2070
Amino acid ABC transporter ATP-binding protein.
 
 0.846
AZC_0818
ABC transporter ATP-binding protein.
 
 0.834
AZC_1839
Polar amino acid uptake family ABC transporter ATP-binding protein.
 
 0.832
AZC_2734
ABC transporter ATP-binding protein.
 
 0.828
AZC_3874
Amino acid ABC transporter ATP-binding protein.
 
 0.821
AZC_2679
ABC-type polar amino acid transport system ATP-binding protein.
 
 0.805
AZC_2485
ABC transporter ATP-binding protein.
 
 0.800
AZC_2618
ABC transporter nucleotide binding ATPase protein.
 
 0.793
AZC_3281
ABC transporter.
 
 0.793
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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