STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0765Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (484 aa)    
Predicted Functional Partners:
AZC_3745
Succinate dehydrogenase or fumarate reductase; Flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.929
AZC_1645
Aminotransferase; Class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.924
AZC_3990
Aminotransferase; Class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.924
AZC_3746
Succinate dehydrogenase/fumarate reductase iron-sulfur protein.
   
 
 0.914
AZC_3728
acetyl-CoA hydrolase.
  
 
 0.909
AZC_0555
2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.908
AZC_3743
Succinate dehydrogenase cytochrome b-556 subunit.
   
 
  0.905
AZC_3744
Succinate dehydrogenase hydrophobic membrane anchor protein.
   
 
 0.905
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.901
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.881
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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