STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0777ABC transporter substrate binding protein. (543 aa)    
Predicted Functional Partners:
AZC_0775
ABC transporter permease protein.
   0.906
AZC_0774
ABC transporter permease protein.
   0.893
AZC_0776
ABC transporter substrate binding protein.
 
  
 
0.709
AZC_1552
ABC transporter permease protein.
   0.576
AZC_2696
Peptide ABC transporter permease protein.
   0.552
AZC_1553
Putative oligopeptide ABC transporter permease component.
   0.547
AZC_2627
ABC transporter permease protein.
   0.539
AZC_2697
Peptide/opine/nickel uptake family ABC transporter permease.
   0.536
AZC_2628
ABC transporter permease protein.
   0.528
AZC_2655
ABC transporter substrate binding protein.
  
  
 
0.528
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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