STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0789Transthyretin family protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (117 aa)    
Predicted Functional Partners:
AZC_0788
Uncharacterized protein; Conserved in bacteria.
  
 0.996
AZC_1968
Hypothetical transthyretin-like protein.
  
  
 
0.914
AZC_0787
Amidase; Hydantoinase/carbamoylase.
 
   
 0.871
AZC_1988
Putative polysaccharide deacetylase.
 
    0.843
AZC_0792
Protein of unknown function.
 
  
 0.818
AZC_4625
Putative guanine aminohydrolase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.768
AZC_1635
Putative polysaccharide deacetylase.
 
    0.765
AZC_0790
Xanthine/uracil permease family protein.
 
  
 0.696
AZC_3706
Putative ureidoglycolate hydrolase.
 
    0.608
AZC_2505
Polysaccharide deacetylase; Polysacc_deac_1.
 
    0.590
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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