STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0807Acetylornithine deacetylase; Succinyl-diaminopimelate desuccinylase and related deacylase. (469 aa)    
Predicted Functional Partners:
AZC_0812
Peptide ABC transporter periplasmic peptide-binding protein.
 
     0.797
AZC_0806
Peptidase; M20/M25/M40 family protein.
 
     0.786
AZC_0810
Peptide ABC transporter permease protein.
 
     0.666
AZC_2262
Hypothetical protein.
  
 
   0.631
AZC_0811
Peptide ABC transporter permease protein.
 
     0.608
AZC_0808
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.588
AZC_0809
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.550
lysR-12
Transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.515
AZC_2074
Peptidase dimerisation, peptidase M20.
 
     0.496
AZC_0805
Uncharacterized BCR protein; YitT family.
       0.423
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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