STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0903Serine protease; Trypsin family. (410 aa)    
Predicted Functional Partners:
AZC_1136
Peptidase S1C protein; Belongs to the peptidase S1C family.
  
  
 
0.928
AZC_2572
Serine protease DO-like protein; Belongs to the peptidase S1C family.
  
  
 
0.928
AZC_0904
Unknown protein.
       0.773
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
 0.646
AZC_0902
Periplasmic serine protease.
     
 0.613
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.565
AZC_0499
Sel1-like repeat protein.
  
 
 0.544
AZC_1154
Sel1-like repeat protein.
  
 
 0.535
AZC_2873
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.525
AZC_0905
Putative O-methyltransferase; Belongs to the methyltransferase superfamily.
       0.510
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.