STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0963Putative 2-keto-gluconate dehydrogenase. (522 aa)    
Predicted Functional Partners:
AZC_0962
Twin-arginine translocation pathway signal.
 
     0.902
AZC_0961
Lactoylglutathione lyase.
 
  
 0.786
AZC_0964
Uncharacterized protein; Related to arylsulfate sulfotransferase.
 
     0.783
AZC_2801
Pyrroloquinoline-quinone aldehyde dehydrogenase.
  
 
 0.661
AZC_2718
Conserved hypothetical protein; Twin-arginine translocation pathway signal.
 
 0.577
AZC_3439
Rhodanese-like protein; Ankyrin.
   
 0.565
AZC_0287
WD-40 repeat G-protein beta.
    
 0.554
AZC_2218
Putative transmembrane protein.
    
 0.554
AZC_4573
Hypothetical ANK-repeat protein.
    
 0.548
AZC_3166
Putative sulfite oxidase cytochrome subunit.
 
 
 
 0.486
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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