STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1002Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (512 aa)    
Predicted Functional Partners:
cobW-2
CobW protein.
     
 0.721
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.705
AZC_4544
Putative penicillin-binding protein.
 
  
 0.527
AZC_3264
Putative DNA segregation ATPase; FtsK/SpoIIIE and related protein; Belongs to the FtsK/SpoIIIE/SftA family.
 
   
 0.485
ftsK
Possible FtsK/SpoIIIE family.
 
   
 0.468
AZC_4554
Cell division protein precursor; Belongs to the SEDS family.
 
   
 0.462
AZC_0162
UTP--glucose-1-phosphate uridylyltransferase; Bacterial and archaeal type.
 
   
 0.460
ndvA
Putative beta-1,2-glucan ABC export system ATP-binding protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
       0.435
nusG
Transcription antitermination protein; Participates in transcription elongation, termination and antitermination.
  
  
 0.418
AZC_2223
Lytic murein transglycosylase.
 
  
 0.400
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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