STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1088Putative ATPase; Involved in DNA replication initiation. (165 aa)    
Predicted Functional Partners:
AZC_1089
Translation initiation factor IF-2.
 
   0.867
AZC_1013
DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]
  
 
 0.854
AZC_1115
Conserved hypothetical protein; Phage phiE125 gp8.
  
     0.710
AZC_1685
Protein of unknown function; DUF1467.
  
     0.665
AZC_0309
Hypothetical protein.
  
     0.654
AZC_1119
Putative gene transfer agent (GTA) protein.
  
     0.650
AZC_0492
Protein of unknown function; DUF1465.
  
   
 0.646
AZC_2384
Hypothetical protein.
  
     0.631
AZC_0399
Conserved hypothetical protein; CHP02301.
  
     0.622
AZC_1118
Phage major tail protein; TP901-1.
  
     0.621
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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