STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1105Conserved hypothetical protein; Terminase-like. (436 aa)    
Predicted Functional Partners:
AZC_1109
Phage portal protein; HK97.
    0.893
AZC_1127
Gene transfer agent (GTA) product.
    0.849
AZC_1119
Putative gene transfer agent (GTA) protein.
 
    0.831
AZC_1121
Putative gene transfer agent (GTA) orfg11.
 
    0.813
AZC_1113
Phage major capsid protein; HK97.
 
    0.803
AZC_1115
Conserved hypothetical protein; Phage phiE125 gp8.
 
    0.803
AZC_1118
Phage major tail protein; TP901-1.
 
     0.803
AZC_1124
Conserved hypothetical protein; 2217.
 
     0.802
AZC_1125
Conserved hypothetical protein.
 
     0.802
AZC_1112
Peptidase; U35, phage prohead HK97.
 
     0.801
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.