STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1173Iron-sulfur cluster-binding protein 1; Rieske family. (419 aa)    
Predicted Functional Partners:
AZC_1174
Iron-sulfur cluster-binding protein 2.
  
 0.993
AZC_1179
Conserved hypothetical protein; Electron transfer flavoprotein beta-subunit.
 
    0.974
AZC_1177
Putative ferredoxin.
 
  
 0.966
AZC_1171
Sarcosine oxidase delta subunit.
 
    0.944
AZC_1176
FMN oxidoreductase.
 
  
 0.938
AZC_1170
Sarcosine oxidase alpha subunit.
 
  
 0.933
AZC_2458
Conserved hypothetical protein; 4-vinyl reductase.
 
    0.933
AZC_1169
Sarcosine oxidase gamma subunit.
 
  
 0.926
araC
Transcriptional regulator; AraC family.
 
  
 0.892
AZC_1178
Putative electron transfer flavoprotein alpha subunit.
 
    0.872
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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