STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1237Opine oxidase subunit A. (475 aa)    
Predicted Functional Partners:
AZC_1235
Opine oxidase subunit B.
 0.997
AZC_1238
Putative sarcosine oxidase beta subunit.
 
 0.991
AZC_2684
Probably FAD dependent oxidoreductase family protein.
 
 0.976
AZC_3048
Putative FAD dependent oxidoreductase.
 
 0.967
AZC_1236
Putative sarcosine oxidase alpha subunit.
 
  
 0.966
AZC_0983
Orn/Lys/Arg decarboxylase.
   
 
  0.900
AZC_1231
ABC transporter substrate binding protein.
 
     0.880
AZC_3046
Conserved hypothetical protein; Similar to ferredoxin.
 
  
 0.816
AZC_3037
Argininosuccinate lyase.
    
  0.803
argH
Argininosuccinate lyase.
    
  0.803
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.