STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1256TonB-dependent receptor. (701 aa)    
Predicted Functional Partners:
AZC_1260
C-terminal TonB protein.
 
 
 0.900
tolA
Putative TolA protein.
  
 
 0.830
fecR-2
Putative iron siderophore sensor protein.
 
  
 0.678
fecR-3
Putative iron siderophore sensor protein.
 
  
 0.640
exbD
TonB system transport protein.
  
  
 0.611
exbB
Biopolymer transport protein.
  
  
 0.608
fecR
FecR protein.
 
  
 0.603
AZC_1333
TonB-dependent receptor.
  
  
 0.592
AZC_1716
Putative TonB protein.
  
 
 0.578
AZC_3580
Putative phage protein.
  
 
 0.578
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.