STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1297Short-chain dehydrogenase; Reductase. (262 aa)    
Predicted Functional Partners:
AZC_1296
Hypothetical protein.
 
     0.945
lysR-19
Transcriptional regulator; LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.695
AZC_2692
Dihydrodipicolinate synthase family protein; Belongs to the DapA family.
 
    0.632
AZC_3534
Short-chain dehydrogenase.
 
     0.587
AZC_0732
Short-chain dehydrogenase; Reductase SDR.
 
     0.556
AZC_2861
Twin-arginine translocation pathway signal precursor.
   
 
 0.442
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
 
 0.429
AZC_4312
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.418
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.