STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1306Protein of unknown function; DUF900. (382 aa)    
Predicted Functional Partners:
AZC_0347
Protein of unknown function; DUF1150.
  
     0.660
AZC_0396
Conserved hypothetical protein; Tyrosine specific protein phosphatase.
  
     0.554
AZC_1307
Lysophospholipase.
 
     0.548
AZC_3122
PAS protein.
  
     0.519
AZC_2218
Putative transmembrane protein.
 
     0.469
AZC_0444
Protein of unknown function; DUF1036.
  
     0.463
AZC_0340
Twin-arginine translocation pathway signal.
  
     0.458
AZC_3961
Outer membrane protein Omp31 precursor.
  
     0.448
AZC_3114
Conserved hypothetical membrane spanning protein.
  
     0.443
AZC_0757
Conserved hypothetical protein; Bacterial surface antigen (D15).
  
     0.441
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.