STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araC-5Transcriptional regulator; AraC family. (310 aa)    
Predicted Functional Partners:
AZC_1344
Sensor protein.
 
 
 
 0.786
araC-6
Regulatory protein; Helix-turn-helix, AraC type.
 
 
 0.673
araC
Transcriptional regulator; AraC family.
 
 
 0.604
AZC_1692
Putative protease.
  
     0.603
AZC_3049
Transcriptional regulator; Helix-turn-helix, AraC type.
 
 
 0.546
AZC_0980
Conserved hypothetical protein.
  
     0.519
araC-11
Transcriptional regulator; AraC family.
  
     0.505
AZC_3521
Glycosyltransferase; Family 28.
  
   
 0.445
AZC_1300
Putative two-component sensor histidine kinase.
  
     0.436
AZC_3008
Putative Na+/phosphate symporter.
  
     0.404
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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