STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1404Alpha amylase; Catalytic region. (828 aa)    
Predicted Functional Partners:
AZC_1403
Putative 1,4-alpha-glucan branching enzyme protein.
 
 0.999
AZC_2750
Putative glycogen debranching protein; Belongs to the glycosyl hydrolase 13 family.
 
 0.996
AZC_4115
Alpha amylase; Catalytic subdomain.
 
 
 0.992
AZC_4117
4-alpha-glucanotransferase.
  
 0.989
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
  
 0.873
AZC_4114
Alpha amylase.
 
  
0.592
AZC_0482
Putative OtsA trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
 
  
 0.591
AZC_1401
Putative oxidoreductase; Molybdopterin-binding subunit.
 
     0.590
AZC_0483
Putative trehalose-6-phosphate phophatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.575
AZC_1400
Putative oxidoreductase.
 
     0.571
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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