STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1458Putative acetyltransferase. (103 aa)    
Predicted Functional Partners:
AZC_0422
Conserved hypothetical protein; Saccharopine dehydrogenase.
  
    0.670
AZC_0299
Pyridoxamine 5'-phosphate oxidase-related protein.
   
    0.609
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
    0.609
AZC_0873
Unknown protein; Belongs to the UPF0337 (CsbD) family.
  
    0.577
AZC_3531
Putative mismatched base pair and cruciform DNA recognition protein; CsbD-like family; Belongs to the UPF0337 (CsbD) family.
  
    0.577
AZC_1459
Hypothetical protein.
       0.466
araC-8
Transcriptional regulator; AraC family.
  
    0.440
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
  
 0.414
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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