STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1496Sarcosine oxidase beta subunit; Heterotetrameric. (416 aa)    
Predicted Functional Partners:
AZC_1494
Sarcosine oxidase alpha subunit; Heterotetrameric.
 
 0.998
AZC_1493
Sarcosine oxidase gamma subunit.
 
 0.995
AZC_1495
Sarcosine oxidase delta subunit.
 
 0.995
AZC_1170
Sarcosine oxidase alpha subunit.
 
 
 0.960
AZC_1501
Putative oxidoreductase.
 
 
  0.937
AZC_1502
Amidophosphoribosyltransferase.
 
 
  0.934
AZC_1500
Glutamate synthase family protein; Belongs to the glutamate synthase family.
 
 
 0.932
AZC_0890
Formaldehyde-activating enzyme.
     
  0.900
AZC_1171
Sarcosine oxidase delta subunit.
 
 
 0.844
AZC_1169
Sarcosine oxidase gamma subunit.
 
 
 0.818
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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