STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1503Transcriptional regulator; Helix-turn-helix motif. (249 aa)    
Predicted Functional Partners:
AZC_1502
Amidophosphoribosyltransferase.
 
   
 0.904
AZC_1501
Putative oxidoreductase.
 
     0.903
AZC_1500
Glutamate synthase family protein; Belongs to the glutamate synthase family.
 
     0.894
AZC_1499
Glutamine synthetase III.
 
  
 0.855
AZC_1373
Hypothetical protein.
 
     0.641
AZC_0592
Putative cyclase.
  
    0.608
AZC_2342
Hypothetical protein.
  
    0.608
AZC_1371
Hypothetical protein.
 
     0.607
AZC_0591
Prokaryotic protein of unknown function; DUF849.
  
    0.594
AZC_2881
Prokaryotic protein of unknown function; DUF849.
  
    0.594
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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