Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZC_1558 | AZC_1559 | AZC_1558 | AZC_1559 | Conserved hypothetical protein; Glycosyl transferase, family 2. | Unknown protein. | 0.558 |
AZC_1559 | AZC_1558 | AZC_1559 | AZC_1558 | Unknown protein. | Conserved hypothetical protein; Glycosyl transferase, family 2. | 0.558 |
AZC_1559 | AZC_1560 | AZC_1559 | AZC_1560 | Unknown protein. | Hypothetical protein. | 0.495 |
AZC_1559 | AZC_3616 | AZC_1559 | AZC_3616 | Unknown protein. | Putative cysteine desulfurase; nifS-like protein. | 0.508 |
AZC_1559 | nifQ | AZC_1559 | AZC_3444 | Unknown protein. | NifQ protein. | 0.403 |
AZC_1559 | nifS | AZC_1559 | AZC_3411 | Unknown protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.508 |
AZC_1559 | nifU | AZC_1559 | AZC_0943 | Unknown protein. | NifU-like protein. | 0.403 |
AZC_1560 | AZC_1559 | AZC_1560 | AZC_1559 | Hypothetical protein. | Unknown protein. | 0.495 |
AZC_3616 | AZC_1559 | AZC_3616 | AZC_1559 | Putative cysteine desulfurase; nifS-like protein. | Unknown protein. | 0.508 |
AZC_3616 | nifQ | AZC_3616 | AZC_3444 | Putative cysteine desulfurase; nifS-like protein. | NifQ protein. | 0.942 |
AZC_3616 | nifS | AZC_3616 | AZC_3411 | Putative cysteine desulfurase; nifS-like protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.912 |
AZC_3616 | nifU | AZC_3616 | AZC_0943 | Putative cysteine desulfurase; nifS-like protein. | NifU-like protein. | 0.984 |
nifQ | AZC_1559 | AZC_3444 | AZC_1559 | NifQ protein. | Unknown protein. | 0.403 |
nifQ | AZC_3616 | AZC_3444 | AZC_3616 | NifQ protein. | Putative cysteine desulfurase; nifS-like protein. | 0.942 |
nifQ | nifS | AZC_3444 | AZC_3411 | NifQ protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.951 |
nifS | AZC_1559 | AZC_3411 | AZC_1559 | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | Unknown protein. | 0.508 |
nifS | AZC_3616 | AZC_3411 | AZC_3616 | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | Putative cysteine desulfurase; nifS-like protein. | 0.912 |
nifS | nifQ | AZC_3411 | AZC_3444 | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | NifQ protein. | 0.951 |
nifS | nifU | AZC_3411 | AZC_0943 | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | NifU-like protein. | 0.984 |
nifU | AZC_1559 | AZC_0943 | AZC_1559 | NifU-like protein. | Unknown protein. | 0.403 |
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