STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1685Protein of unknown function; DUF1467. (91 aa)    
Predicted Functional Partners:
AZC_1684
methylmalonyl-CoA epimerase.
       0.777
AZC_3683
Hypothetical protein.
  
     0.719
AZC_2954
Protein of unknown function; DUF983.
  
     0.701
AZC_4443
Hypothetical protein.
  
     0.668
AZC_1088
Putative ATPase; Involved in DNA replication initiation.
  
     0.665
AZC_1683
Putative hydrolase of the metallo-beta-lactamase superfamily.
       0.629
AZC_1682
biotin--acetyl-CoA-carboxylase ligase.
       0.625
AZC_3670
Putative transglutaminase-like cysteine peptidase; BTLCP.
  
     0.623
AZC_1858
Putative uncharacterized protein; Protein conserved in bacteria.
  
     0.537
AZC_0492
Protein of unknown function; DUF1465.
  
     0.536
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.