Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZC_1918 | AZC_1919 | AZC_1918 | AZC_1919 | Transcriptional regulatory protein; Fis-type. | Unknown protein. | 0.468 |
AZC_1919 | AZC_1918 | AZC_1919 | AZC_1918 | Unknown protein. | Transcriptional regulatory protein; Fis-type. | 0.468 |
AZC_1919 | AZC_1920 | AZC_1919 | AZC_1920 | Unknown protein. | Uncharacterized conserved protein; COG1917, contains double-stranded beta-helix domain. | 0.478 |
AZC_1919 | AZC_3616 | AZC_1919 | AZC_3616 | Unknown protein. | Putative cysteine desulfurase; nifS-like protein. | 0.630 |
AZC_1919 | dnaJ-5 | AZC_1919 | AZC_4548 | Unknown protein. | Heat shock protein. | 0.460 |
AZC_1919 | nifQ | AZC_1919 | AZC_3444 | Unknown protein. | NifQ protein. | 0.459 |
AZC_1919 | nifS | AZC_1919 | AZC_3411 | Unknown protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.630 |
AZC_1919 | nifU | AZC_1919 | AZC_0943 | Unknown protein. | NifU-like protein. | 0.459 |
AZC_1920 | AZC_1919 | AZC_1920 | AZC_1919 | Uncharacterized conserved protein; COG1917, contains double-stranded beta-helix domain. | Unknown protein. | 0.478 |
AZC_3616 | AZC_1919 | AZC_3616 | AZC_1919 | Putative cysteine desulfurase; nifS-like protein. | Unknown protein. | 0.630 |
AZC_3616 | dnaJ-5 | AZC_3616 | AZC_4548 | Putative cysteine desulfurase; nifS-like protein. | Heat shock protein. | 0.742 |
AZC_3616 | nifQ | AZC_3616 | AZC_3444 | Putative cysteine desulfurase; nifS-like protein. | NifQ protein. | 0.942 |
AZC_3616 | nifS | AZC_3616 | AZC_3411 | Putative cysteine desulfurase; nifS-like protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.912 |
AZC_3616 | nifU | AZC_3616 | AZC_0943 | Putative cysteine desulfurase; nifS-like protein. | NifU-like protein. | 0.984 |
dnaJ-5 | AZC_1919 | AZC_4548 | AZC_1919 | Heat shock protein. | Unknown protein. | 0.460 |
dnaJ-5 | AZC_3616 | AZC_4548 | AZC_3616 | Heat shock protein. | Putative cysteine desulfurase; nifS-like protein. | 0.742 |
dnaJ-5 | nifQ | AZC_4548 | AZC_3444 | Heat shock protein. | NifQ protein. | 0.945 |
dnaJ-5 | nifS | AZC_4548 | AZC_3411 | Heat shock protein. | Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. | 0.736 |
dnaJ-5 | nifU | AZC_4548 | AZC_0943 | Heat shock protein. | NifU-like protein. | 0.945 |
nifQ | AZC_1919 | AZC_3444 | AZC_1919 | NifQ protein. | Unknown protein. | 0.459 |
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