STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1986ABC transporter substrate binding protein. (528 aa)    
Predicted Functional Partners:
AZC_1985
ABC transporter permease protein.
   0.909
AZC_1984
ABC transporter permease protein.
   0.907
AZC_1983
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.805
AZC_1982
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.797
AZC_2909
ABC transporter permease protein.
   0.766
AZC_2910
ABC transporter permease protein.
   0.754
AZC_1987
Amidohydrolase; Peptidase M20D.
   
   0.521
AZC_3779
Putative extracellular solute-binding protein; Family 5 precursor.
  
  
 
0.510
AZC_2913
ABC-type dipeptide transport periplasmic component.
  
  
 
0.502
AZC_2213
Protein of unknown function; DUF140.
  
  
  0.501
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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