Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AZC_1990ABC transporter permease protein. (278 aa)    
Predicted Functional Partners:
AZC_1989
ABC transporter permease protein.
 
 0.987
AZC_2455
Polyamine ABC transporter permease protein.
 
 0.983
AZC_2461
Spermidine/putrescine ABC transporter permease precursor.
 
 0.967
AZC_1991
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.966
AZC_1969
ABC transporter permease protein 1.
 
 0.962
AZC_1234
ABC transporter permease protein.
 
 0.956
AZC_1799
ABC opine/polyamine transporter inner membrane subunit 1.
 
0.940
AZC_3517
Spermidine/putrescine ABC transporter permease protein.
 
 0.933
AZC_1992
Twin-arginine translocation pathway signal precursor.
 
     0.921
AZC_2723
ABC transporter permease protein.
 
0.898
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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