STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2009Putative adolase; Adducin. (266 aa)    
Predicted Functional Partners:
AZC_4341
5-methyltetrahydrofolate-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.601
AZC_1227
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
   
    0.485
AZC_1841
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
   
    0.485
AZC_1877
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
   
    0.485
AZC_3736
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
   
    0.485
ocd2
Ornithine cyclodeaminase.
       0.464
AZC_2687
Ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
  
  
 0.448
AZC_1644
Putative phosphoserine phosphatase.
  
  
 0.413
AZC_3989
Phosphoserine phosphatase.
  
  
 0.413
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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