Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2012Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
AZC_2013
Oligopeptide ABC transporter permease protein.
   0.984
AZC_2652
Oligopeptide/dipeptide ABC transporter permease component protein.
   0.951
AZC_0774
ABC transporter permease protein.
   0.948
AZC_1869
ABC transporter permease protein.
   0.943
AZC_3775
Oligopeptide ABC transporter permease protein.
   0.941
AZC_2047
ABC transporter permease protein.
   0.940
AZC_2993
ABC-type dipeptide/oligopeptide/nickel transport permease protein.
   0.931
AZC_2628
ABC transporter permease protein.
   0.929
AZC_2661
ABC transporter permease protein.
   0.927
AZC_2014
ABC transporter permease protein.
 
 
 0.906
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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