STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2015ABC transporter substrate binding protein. (533 aa)    
Predicted Functional Partners:
AZC_2013
Oligopeptide ABC transporter permease protein.
 
   0.945
AZC_2014
ABC transporter permease protein.
   0.940
AZC_2012
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.773
AZC_2011
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
    0.772
AZC_2078
ABC transporter permease protein.
   0.754
AZC_2079
ABC transporter permease protein.
 
   0.752
AZC_2074
Peptidase dimerisation, peptidase M20.
  
     0.745
AZC_2076
MlrC-like protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.739
AZC_1870
Binding-protein-dependent transport systems inner membrane component.
 
   0.556
AZC_1869
ABC transporter permease protein.
   0.535
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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