STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2017N-carbamyl-D-amino acid amidohydrolase. (311 aa)    
Predicted Functional Partners:
AZC_2490
Hydantoin racemase.
     0.717
AZC_1965
Putative hydantoin racemase.
 
     0.688
AZC_1966
D-hydantoinase.
 
  
 0.677
AZC_2016
Amidohydrolase.
       0.648
AZC_2674
D-hydantoinase.
 
  
 0.627
AZC_4372
Asp/Glu racemase.
 
     0.469
AZC_2484
Amino acid ABC transporter solute-binding protein.
 
     0.464
AZC_0036
Putative fatty acid synthase transmembrane protein.
     
 0.442
AZC_1170
Sarcosine oxidase alpha subunit.
   
 
 0.413
AZC_1494
Sarcosine oxidase alpha subunit; Heterotetrameric.
   
 
 0.413
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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