STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2019Helix-turn-helix XRE-family-like protein. (217 aa)    
Predicted Functional Partners:
AZC_2073
Helix-turn-helix XRE-family like protein.
  
  
 0.757
AZC_3532
Putative transcriptional regulator.
  
  
 0.587
AZC_2023
D-amino-acid dehydrogenase.
 
    0.554
AZC_0036
Putative fatty acid synthase transmembrane protein.
  
  
 0.533
AZC_3923
Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor.
     
 0.519
araC-2
Transcriptional regulator; AraC family.
  
 
 0.513
AZC_3285
Putative transcription regulator protein.
  
  
 0.511
guaA
Putative GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.509
AZC_2020
Amidase.
  
    0.504
AZC_1503
Transcriptional regulator; Helix-turn-helix motif.
 
  
0.482
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.