STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2046ABC transporter permease protein. (325 aa)    
Predicted Functional Partners:
AZC_2047
ABC transporter permease protein.
    0.962
AZC_2045
ABC transporter substrate binding protein.
   0.911
AZC_2652
Oligopeptide/dipeptide ABC transporter permease component protein.
    0.838
AZC_2661
ABC transporter permease protein.
    0.837
AZC_3775
Oligopeptide ABC transporter permease protein.
    0.832
AZC_0774
ABC transporter permease protein.
    0.831
AZC_1869
ABC transporter permease protein.
    0.828
AZC_2696
Peptide ABC transporter permease protein.
    0.825
AZC_2993
ABC-type dipeptide/oligopeptide/nickel transport permease protein.
    0.825
AZC_2078
ABC transporter permease protein.
    0.821
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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