STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2084YeeE/YedE family protein. (143 aa)    
Predicted Functional Partners:
AZC_2083
YeeE/YedE family protein.
   
 0.990
AZC_2082
Beta-lactamase-like protein.
 
     0.849
AZC_2085
Hypothetical protein.
       0.772
arsR-3
Transcriptional regulator; ArsR family.
       0.598
AZC_2081
Protein of unknown function; DUF81.
     
 0.591
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.587
AZC_2198
Hypothetical protein; Putative SirA_YedF_YeeD, SirA, YedF, and YeeD; Belongs to the sulfur carrier protein TusA family.
  
  
 0.583
AZC_0925
Nitrite/sulfite reductase; Hemoprotein beta-component, ferrodoxin-like:nitrite and sulphite reductase 4Fe-4S region.
  
    0.412
AZC_0460
Large subunit glutamate synthase.
      
 0.405
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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