STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
surF1SurF1 family protein. (256 aa)    
Predicted Functional Partners:
AZC_2098
Cytochrome o ubiquinol oxidase subunit II.
 
 
 0.954
AZC_2100
Cytochrome o ubiquinol oxidase subunit III.
 
  
 0.951
AZC_2101
Cytochrome o ubiquinol oxidase subunit IV.
 
     0.947
AZC_2099
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.936
AZC_2103
Two-component, sensor histidine protein kinase.
 
     0.935
fis-2
Two component transcriptional regulator; Fis family.
 
     0.916
AZC_2097
MFS permease.
 
     0.859
ctaA
Putative cytochrome c oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
 
 
 0.794
ctaG
Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.779
AZC_2260
UDP-glucose 6-dehydrogenase.
 
      0.618
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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