STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2103Two-component, sensor histidine protein kinase. (437 aa)    
Predicted Functional Partners:
fis-2
Two component transcriptional regulator; Fis family.
  
 0.995
AZC_4693
Transcriptional regulator; Helix-turn-helix, Fis-type.
  
 0.977
surF1
SurF1 family protein.
 
     0.935
AZC_2101
Cytochrome o ubiquinol oxidase subunit IV.
 
     0.930
AZC_4692
Histidine kinase A; ATPase-like ATP-binding region.
  
 
 
0.929
AZC_2098
Cytochrome o ubiquinol oxidase subunit II.
 
   
 0.906
AZC_2100
Cytochrome o ubiquinol oxidase subunit III.
 
     0.896
AZC_2099
Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
     0.845
AZC_2097
MFS permease.
 
     0.762
AZC_2953
Putative surfeit locus protein; Surfeit 1.
 
     0.661
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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