STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2114MmgE/PrpD family protein. (464 aa)    
Predicted Functional Partners:
AZC_2115
Isocitrate lyase family protein.
 
  
 0.913
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.907
AZC_2111
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.818
AZC_2112
ABC transporter ATP-binding protein.
 
     0.807
AZC_2110
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.802
AZC_2109
Branched-chain amino acid transport system substrate-binding protein.
 
     0.779
AZC_2113
ABC transporter ATP-binding protein.
       0.773
AZC_2118
Isochorismatase family protein.
 
     0.730
AZC_0687
Putative carboxyvinyl-carboxyphosphonate phosphorylmutase.
  
  
 0.729
AZC_2105
Fumarate reductase; Succinate dehydrogenase flavoprotein-like.
 
     0.724
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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