Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AZC_0036 | AZC_0056 | Putative fatty acid synthase transmembrane protein. | Cytochrome P450. | 0.957 |
AZC_0036 | AZC_0979 | Putative fatty acid synthase transmembrane protein. | Sterol desaturase family protein. | 0.625 |
AZC_0036 | AZC_2119 | Putative fatty acid synthase transmembrane protein. | FAD-dependent monooxygenase. | 0.488 |
AZC_0036 | AZC_2121 | Putative fatty acid synthase transmembrane protein. | Conserved hypothetical protein; Esterase/lipase/thioesterase. | 0.737 |
AZC_0036 | AZC_3543 | Putative fatty acid synthase transmembrane protein. | Putative salicylate hydroxylase. | 0.488 |
AZC_0056 | AZC_0036 | Cytochrome P450. | Putative fatty acid synthase transmembrane protein. | 0.957 |
AZC_0056 | AZC_0979 | Cytochrome P450. | Sterol desaturase family protein. | 0.574 |
AZC_0056 | AZC_2119 | Cytochrome P450. | FAD-dependent monooxygenase. | 0.465 |
AZC_0979 | AZC_0036 | Sterol desaturase family protein. | Putative fatty acid synthase transmembrane protein. | 0.625 |
AZC_0979 | AZC_0056 | Sterol desaturase family protein. | Cytochrome P450. | 0.574 |
AZC_0979 | AZC_2119 | Sterol desaturase family protein. | FAD-dependent monooxygenase. | 0.436 |
AZC_0979 | AZC_3543 | Sterol desaturase family protein. | Putative salicylate hydroxylase. | 0.436 |
AZC_2119 | AZC_0036 | FAD-dependent monooxygenase. | Putative fatty acid synthase transmembrane protein. | 0.488 |
AZC_2119 | AZC_0056 | FAD-dependent monooxygenase. | Cytochrome P450. | 0.465 |
AZC_2119 | AZC_0979 | FAD-dependent monooxygenase. | Sterol desaturase family protein. | 0.436 |
AZC_2119 | AZC_2120 | FAD-dependent monooxygenase. | Isochorismatase hydrolase. | 0.554 |
AZC_2119 | AZC_2121 | FAD-dependent monooxygenase. | Conserved hypothetical protein; Esterase/lipase/thioesterase. | 0.630 |
AZC_2119 | AZC_3543 | FAD-dependent monooxygenase. | Putative salicylate hydroxylase. | 0.501 |
AZC_2120 | AZC_2119 | Isochorismatase hydrolase. | FAD-dependent monooxygenase. | 0.554 |
AZC_2120 | AZC_2121 | Isochorismatase hydrolase. | Conserved hypothetical protein; Esterase/lipase/thioesterase. | 0.830 |
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