STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2139Unknown protein. (127 aa)    
Predicted Functional Partners:
AZC_2140
Hypothetical protein.
       0.795
AZC_2141
Mu-like prophage FluMu protein gp27.
       0.794
AZC_2142
Mu-like prophage FluMu protein gp28.
       0.794
AZC_2143
Mu-like prophage protein gp29.
       0.787
AZC_2144
Phage Mu protein F like protein.
       0.785
AZC_2137
Phage-related lysozyme.
       0.777
AZC_2138
Hypothetical protein.
       0.775
AZC_2145
Hypothetical protein.
       0.455
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.