STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2149Mu-like prophage major head subunit gpT. (300 aa)    
Predicted Functional Partners:
AZC_2147
Putative prophage MuSo2 protein; Protein gp32.
 
  
 0.934
AZC_2148
Hypothetical protein.
 
     0.930
AZC_2152
Prophage MuSo2; Putative virion morphogenesis protein.
 
    0.898
AZC_2143
Mu-like prophage protein gp29.
 
  
 0.884
AZC_2142
Mu-like prophage FluMu protein gp28.
 
     0.831
AZC_2144
Phage Mu protein F like protein.
 
     0.831
AZC_2129
Transposase protein B; Putative prophage MuMc02.
 
  
 0.794
AZC_2133
Hypothetical protein.
 
    0.788
AZC_2128
Transposase protein A; Putative prophage MuMc02.
  
  
 0.770
AZC_2150
Unknown protein.
       0.768
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.