STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_2162Putative phage tail sheath protein. (412 aa)    
Predicted Functional Partners:
AZC_2163
Unknown protein.
  
 
 0.990
AZC_2156
Putative phage gp25 protein.
  
 
 0.989
AZC_2157
Putative phage-related baseplate assembly protein.
 
   0.986
AZC_2167
Putative phage late control gene D protein; GPD.
 
 
 0.985
AZC_2166
Unknown protein.
  
 
 0.967
gpI
Putative bacteriophage P2-related tail formation protein.
  
 
 0.965
AZC_2168
Putative phage late control gene D protein; GPD.
  
 
 0.936
AZC_2154
Phage baseplate assembly protein V.
  
 
 0.915
AZC_2165
Putative phage-related tail protein.
 
  
 0.909
AZC_2152
Prophage MuSo2; Putative virion morphogenesis protein.
 
    0.876
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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